International institute of molecular and cell biology in Warzawa

Family Vax2os1_2


Download the aligments for this family. (.stk)

RNA Shape

Level1
((((()))()(((()()()((((()))))((())))(())))))
Level2
(()()((()()()()())()))

Consensus Secondary Structure representation

Comment:Consensus Secondary Structure predicted by PETfold
>predicted reference Vax2os1_2 
CUUCCUGCAGAUCGCUCGAGCCAGCCUUUGCCAGGGACCUUGACCUAGCACGGACUUGGUCGCCACGCUUAGCUCCCCCUGACCUGCUUUUGAACCCGCUAAUCCACCCCAACUCUUGCCCCGACGUUCACUCCACGCGCUAAUUCCCGGGGGCCCCACAGCCCCCACACUCCCUCUCGGCCCGAGGCUCUGAAGGGCACAACCAGGGCUCCACACUGAAGCAAUGGCCUCAGCUACAAAUAUCCCUCUCCUUGGUUCCCCUUAAUUUAAUUCGUUUUCUUUUUUUCAAAACAAUAACCAUACAAAUACCAAUCUUCCGGAACGGAAACGAAUCUGACACACUGGUGGUCUGGCAAAGCAGUGGUCACAGUGGCUGGCCAGGGACGAGAGCCGAGAGCCGGGGAAGGGUAAGCCAGAAUCUAGUGUCCUGCCAAAGCCAGAGAGGCUGGAAGAACCGCAGACACAA
....((((............((((((((.((((((..((..(......)..)).))))))......((...))..........(..(................(((((................(((.......)))...........((((((......)))))).............(((...)))....(((((...((((((((.......((((.((....)).))))................)))))))).))))...)...((((((((..(.....................................((...)))))))))))..........)))))...(((........(((((...))))).)))..........)..........)........................................)))))))).......))))......





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