SimRNA (c) 2009-2024 Genesilico, ver. 3.33

.reading parameteres
before entireStruct->initialize(input)

file: /home/simrnaweb/SimRNAWeb/SIMULATIONS/B23_35_simRNA-b94678c7/inputs/seq.fa first_line: R
number of   RNA   chain(s) decalred/expected in file: /home/simrnaweb/SimRNAWeb/SIMULATIONS/B23_35_simRNA-b94678c7/inputs/seq.fa: 1

curr_seq: _UAUGGUAUGCUGUGUGGUAUGGGGUGGCGUGCUCU_
chainIds_rna: _A_, chainIds_protein: __
chainId: A, chainSeq: UAUGGUAUGCUGUGUGGUAUGGGGUGGCGUGCUCU

RNAStructure(struct InputParam): Fraction Of One Atom Moves = 0.450000
RNAStructure(struct InputParam): Fraction Of Two Atoms Moves = 0.440000
RNAStructure(struct InputParam): Fraction Of Fragment Moves = 0.010000
RNAStructure(struct InputParam): Fraction Of Nitrogen Atom Moves = 0.100000
RNAStructure(struct InputParam): Fraction Of Rigid Rotation Moves = 0.000000
RNAStructure(struct InputParam): Fraction Of Rigid Translation Moves = 0.000000

RNA chains:
chain A contains 35 nucleotides
loading histrogram: ./data/rna/dist_PC.data.new_hist   assigned_name: dist_PC.data.new_hist  DONE
loading histrogram: ./data/rna/dist_CP.data.new_hist   assigned_name: dist_CP.data.new_hist  DONE
loading histrogram: ./data/rna/angle_PCP.data.new_hist   assigned_name: angle_PCP.data.new_hist  DONE
loading histrogram: ./data/rna/angle_CPC.data.new_hist   assigned_name: angle_CPC.data.new_hist  DONE
loading histrogram: ./data/rna/eta_theta.data.new_hist   assigned_name: eta_theta.data.new_hist  DONE
reweighting term eta_theta by 0.400000, default value
scaling: histogram eta_theta.data.new_hist was multiplied by 0.400000
eta-theta term was reweighted by factor 0.400000 provided by the user
reading conformers file: ./data/rna/A_conformers
n_lines: 4766
   16    15    69    34    27 
   46    26   156    83    35 
   93   127  1269    89    50 
  187   157  1927    88    75 
   51    22    67    25    32 
DONE
reading conformers file: ./data/rna/C_conformers
n_lines: 5164
    7     8    61    17     4 
   14    12   143    49    12 
   23   140  2110    21    24 
   88   101  2101    19    36 
   25    21   108     8    12 
DONE
reading conformers file: ./data/rna/G_conformers
n_lines: 6375
   11     7    79    21    50 
   20    17   175    54    39 
   42   102  2774    90    34 
   61    94  2314    71   100 
   20    22   142    15    21 
DONE
reading conformers file: ./data/rna/U_conformers
n_lines: 3617
    6     6    43    33    24 
   20    20   131    50    28 
   30    58  1412    30    24 
   64    82  1197    31    32 
   71    36   132    13    44 
DONE
loading histrogram: ./data/rna/AA3.hist   assigned_name: AA3.hist  DONE
loading histrogram: ./data/rna/AC3.hist   assigned_name: AC3.hist  DONE
loading histrogram: ./data/rna/AG3.hist   assigned_name: AG3.hist  DONE
loading histrogram: ./data/rna/AU3.hist   assigned_name: AU3.hist  DONE
loading histrogram: ./data/rna/CA3.hist   assigned_name: CA3.hist  DONE
loading histrogram: ./data/rna/CC3.hist   assigned_name: CC3.hist  DONE
loading histrogram: ./data/rna/CG3.hist   assigned_name: CG3.hist  DONE
loading histrogram: ./data/rna/CU3.hist   assigned_name: CU3.hist  DONE
loading histrogram: ./data/rna/GA3.hist   assigned_name: GA3.hist  DONE
loading histrogram: ./data/rna/GC3.hist   assigned_name: GC3.hist  DONE
loading histrogram: ./data/rna/GG3.hist   assigned_name: GG3.hist  DONE
loading histrogram: ./data/rna/GU3.hist   assigned_name: GU3.hist  DONE
loading histrogram: ./data/rna/UA3.hist   assigned_name: UA3.hist  DONE
loading histrogram: ./data/rna/UC3.hist   assigned_name: UC3.hist  DONE
loading histrogram: ./data/rna/UG3.hist   assigned_name: UG3.hist  DONE
loading histrogram: ./data/rna/UU3.hist   assigned_name: UU3.hist  DONE
loading histrogram: ./data/rna/AU3_WW-repulsive.hist   assigned_name: AU3_WW-repulsive.hist  DONE
scaling: histogram AU3_WW-repulsive.hist was multiplied by -1.000000
loading histrogram: ./data/rna/CG3_WW-repulsive.hist   assigned_name: CG3_WW-repulsive.hist  DONE
scaling: histogram CG3_WW-repulsive.hist was multiplied by -1.000000
loading histrogram: ./data/rna/GC3_WW-repulsive.hist   assigned_name: GC3_WW-repulsive.hist  DONE
scaling: histogram GC3_WW-repulsive.hist was multiplied by -1.000000
loading histrogram: ./data/rna/GU3_WW-repulsive.hist   assigned_name: GU3_WW-repulsive.hist  DONE
scaling: histogram GU3_WW-repulsive.hist was multiplied by -1.000000
loading histrogram: ./data/rna/UA3_WW-repulsive.hist   assigned_name: UA3_WW-repulsive.hist  DONE
scaling: histogram UA3_WW-repulsive.hist was multiplied by -1.000000
loading histrogram: ./data/rna/UG3_WW-repulsive.hist   assigned_name: UG3_WW-repulsive.hist  DONE
scaling: histogram UG3_WW-repulsive.hist was multiplied by -1.000000
loading histrogram: ./data/rna/A-C4_3.hist   assigned_name: A-C4_3.hist  DONE
loading histrogram: ./data/rna/C-C4_3.hist   assigned_name: C-C4_3.hist  DONE
loading histrogram: ./data/rna/G-C4_3.hist   assigned_name: G-C4_3.hist  DONE
loading histrogram: ./data/rna/U-C4_3.hist   assigned_name: U-C4_3.hist  DONE
loading histrogram: ./data/rna/A-P_3.hist   assigned_name: A-P_3.hist  DONE
loading histrogram: ./data/rna/C-P_3.hist   assigned_name: C-P_3.hist  DONE
loading histrogram: ./data/rna/G-P_3.hist   assigned_name: G-P_3.hist  DONE
loading histrogram: ./data/rna/U-P_3.hist   assigned_name: U-P_3.hist  DONE
loading histrogram: ./data/rna/A_3_exvol.hist   assigned_name: A_3_exvol.hist  DONE
scaling: histogram A_3_exvol.hist was multiplied by 0.100000
loading histrogram: ./data/rna/C_3_exvol.hist   assigned_name: C_3_exvol.hist  DONE
scaling: histogram C_3_exvol.hist was multiplied by 0.100000
loading histrogram: ./data/rna/G_3_exvol.hist   assigned_name: G_3_exvol.hist  DONE
scaling: histogram G_3_exvol.hist was multiplied by 0.100000
loading histrogram: ./data/rna/U_3_exvol.hist   assigned_name: U_3_exvol.hist  DONE
scaling: histogram U_3_exvol.hist was multiplied by 0.100000

x_protein_frc: 0.000
x_rna_frc: 1.000
int EntireStructure::calcNumberOfAtoms(): numberOfAtoms: 180
n_atoms_counter: 180

Fraction Of RNA Moves = 1.000000
Fraction Of Protein Moves = 0.000000
EntireStructure::rnaStruct limitingSphereRadius : 35.000000 DONE
before calcCenterOfMass();
after calcCenterOfMass();
before calcTotalEnergy();
after calcTotalEnergy();
after entireStruct->initialize(input)
leaving: void SimulatedAnnealing::chooseTypeOfChain(struct InputParam input)

random seed = 1
number of iterations = 1600000
trajectory write in every 16000 iterations
initTemp  = 1.350
finalTemp = 0.900
tempStep = -2.812500e-07
DONE

.calculating
=====================================
Write number: 1

Temperature: 1.350000

Total energy: -131.331510 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -131.331510 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -131.331510 (E_RNA)
		where:
			Base-Base interactions energy:   -1.456
			where:  short stacking energy:   -1.456 

			Base-Backbone interact. energy:   -0.000

			local  terms  energy: -129.875656
			where:
				bonds (distance)  C4'-P  energy:  -34.005
				bonds (distance)  P-C4'  energy:  -32.207
				flat angles   C4'-P-C4'  energy:  -25.698
				flat angles    P-C4'-P   energy:  -29.396
				tors. eta vs tors. theta energy:   -8.569

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 2

Temperature: 1.345500

Total energy: -130.915963 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -130.915963 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -130.915963 (E_RNA)
		where:
			Base-Base interactions energy:   -1.856
			where:  short stacking energy:   -1.856 

			Base-Backbone interact. energy:   -0.000

			local  terms  energy: -129.060108
			where:
				bonds (distance)  C4'-P  energy:  -33.773
				bonds (distance)  P-C4'  energy:  -32.197
				flat angles   C4'-P-C4'  energy:  -24.918
				flat angles    P-C4'-P   energy:  -29.236
				tors. eta vs tors. theta energy:   -8.935

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 3

Temperature: 1.341000

Total energy: -113.040138 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -113.040138 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -113.040138 (E_RNA)
		where:
			Base-Base interactions energy:  -43.115
			where:  short stacking energy:  -43.115 

			Base-Backbone interact. energy:    0.023

			local  terms  energy: -69.947509
			where:
				bonds (distance)  C4'-P  energy:  -16.156
				bonds (distance)  P-C4'  energy:  -28.017
				flat angles   C4'-P-C4'  energy:  -18.929
				flat angles    P-C4'-P   energy:  -11.613
				tors. eta vs tors. theta energy:    4.767

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 4

Temperature: 1.336500

Total energy: -127.730172 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -127.730172 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -127.730172 (E_RNA)
		where:
			Base-Base interactions energy:  -52.441
			where:  short stacking energy:  -48.126 

			Base-Backbone interact. energy:   -0.478

			local  terms  energy: -74.810377
			where:
				bonds (distance)  C4'-P  energy:  -20.620
				bonds (distance)  P-C4'  energy:  -22.638
				flat angles   C4'-P-C4'  energy:  -12.327
				flat angles    P-C4'-P   energy:   -9.823
				tors. eta vs tors. theta energy:   -9.402

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 5

Temperature: 1.332000

Total energy: -123.332505 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -123.332505 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -123.332505 (E_RNA)
		where:
			Base-Base interactions energy:  -44.478
			where:  short stacking energy:  -45.821 

			Base-Backbone interact. energy:    0.348

			local  terms  energy: -79.202255
			where:
				bonds (distance)  C4'-P  energy:  -25.821
				bonds (distance)  P-C4'  energy:  -22.326
				flat angles   C4'-P-C4'  energy:  -14.174
				flat angles    P-C4'-P   energy:  -12.813
				tors. eta vs tors. theta energy:   -4.069

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 6

Temperature: 1.327500

Total energy: -118.410358 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -118.410358 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -118.410358 (E_RNA)
		where:
			Base-Base interactions energy:  -46.429
			where:  short stacking energy:  -30.462 

			Base-Backbone interact. energy:    0.062

			local  terms  energy: -72.043836
			where:
				bonds (distance)  C4'-P  energy:  -21.313
				bonds (distance)  P-C4'  energy:  -27.735
				flat angles   C4'-P-C4'  energy:  -11.160
				flat angles    P-C4'-P   energy:   -9.342
				tors. eta vs tors. theta energy:   -2.495

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 7

Temperature: 1.323000

Total energy: -145.896469 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -145.896469 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -145.896469 (E_RNA)
		where:
			Base-Base interactions energy:  -56.632
			where:  short stacking energy:  -56.276 

			Base-Backbone interact. energy:   -0.004

			local  terms  energy: -89.260196
			where:
				bonds (distance)  C4'-P  energy:  -22.840
				bonds (distance)  P-C4'  energy:  -21.949
				flat angles   C4'-P-C4'  energy:  -16.901
				flat angles    P-C4'-P   energy:  -10.480
				tors. eta vs tors. theta energy:  -17.089

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 8

Temperature: 1.318500

Total energy: -123.870384 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -123.870384 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -123.870384 (E_RNA)
		where:
			Base-Base interactions energy:  -38.757
			where:  short stacking energy:  -36.447 

			Base-Backbone interact. energy:    1.214

			local  terms  energy: -86.327443
			where:
				bonds (distance)  C4'-P  energy:  -22.515
				bonds (distance)  P-C4'  energy:  -24.439
				flat angles   C4'-P-C4'  energy:  -21.872
				flat angles    P-C4'-P   energy:  -19.350
				tors. eta vs tors. theta energy:    1.848

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 9

Temperature: 1.314000

Total energy: -129.930315 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -129.930315 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -129.930315 (E_RNA)
		where:
			Base-Base interactions energy:  -52.288
			where:  short stacking energy:  -45.120 

			Base-Backbone interact. energy:   -0.928

			local  terms  energy: -76.714349
			where:
				bonds (distance)  C4'-P  energy:  -22.947
				bonds (distance)  P-C4'  energy:  -19.552
				flat angles   C4'-P-C4'  energy:  -22.743
				flat angles    P-C4'-P   energy:   -6.207
				tors. eta vs tors. theta energy:   -5.266

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 10

Temperature: 1.309500

Total energy: -123.081860 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -123.081860 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -123.081860 (E_RNA)
		where:
			Base-Base interactions energy:  -52.753
			where:  short stacking energy:  -52.286 

			Base-Backbone interact. energy:   -0.469

			local  terms  energy: -69.859956
			where:
				bonds (distance)  C4'-P  energy:  -20.596
				bonds (distance)  P-C4'  energy:  -22.548
				flat angles   C4'-P-C4'  energy:  -13.343
				flat angles    P-C4'-P   energy:  -10.018
				tors. eta vs tors. theta energy:   -3.356

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 11

Temperature: 1.305000

Total energy: -132.515708 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -132.515708 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -132.515708 (E_RNA)
		where:
			Base-Base interactions energy:  -44.464
			where:  short stacking energy:  -44.282 

			Base-Backbone interact. energy:    0.451

			local  terms  energy: -88.502346
			where:
				bonds (distance)  C4'-P  energy:  -22.492
				bonds (distance)  P-C4'  energy:  -23.951
				flat angles   C4'-P-C4'  energy:  -24.773
				flat angles    P-C4'-P   energy:  -17.953
				tors. eta vs tors. theta energy:    0.668

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 12

Temperature: 1.300500

Total energy: -148.950638 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -148.950638 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -148.950638 (E_RNA)
		where:
			Base-Base interactions energy:  -83.452
			where:  short stacking energy:  -60.355 

			Base-Backbone interact. energy:   -0.654

			local  terms  energy: -64.843782
			where:
				bonds (distance)  C4'-P  energy:  -16.672
				bonds (distance)  P-C4'  energy:  -22.614
				flat angles   C4'-P-C4'  energy:  -11.754
				flat angles    P-C4'-P   energy:   -3.102
				tors. eta vs tors. theta energy:  -10.701

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 13

Temperature: 1.296000

Total energy: -142.918151 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -142.918151 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -142.918151 (E_RNA)
		where:
			Base-Base interactions energy:  -59.005
			where:  short stacking energy:  -58.503 

			Base-Backbone interact. energy:   -0.065

			local  terms  energy: -83.848556
			where:
				bonds (distance)  C4'-P  energy:  -16.452
				bonds (distance)  P-C4'  energy:  -20.132
				flat angles   C4'-P-C4'  energy:  -24.057
				flat angles    P-C4'-P   energy:  -12.235
				tors. eta vs tors. theta energy:  -10.972

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 14

Temperature: 1.291500

Total energy: -139.509934 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -139.509934 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -139.509934 (E_RNA)
		where:
			Base-Base interactions energy:  -55.688
			where:  short stacking energy:  -53.182 

			Base-Backbone interact. energy:    0.315

			local  terms  energy: -84.137137
			where:
				bonds (distance)  C4'-P  energy:  -23.329
				bonds (distance)  P-C4'  energy:  -21.792
				flat angles   C4'-P-C4'  energy:  -18.496
				flat angles    P-C4'-P   energy:  -14.424
				tors. eta vs tors. theta energy:   -6.095

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 15

Temperature: 1.287000

Total energy: -144.912465 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -144.912465 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -144.912465 (E_RNA)
		where:
			Base-Base interactions energy:  -52.382
			where:  short stacking energy:  -49.552 

			Base-Backbone interact. energy:   -1.129

			local  terms  energy: -91.401561
			where:
				bonds (distance)  C4'-P  energy:  -23.856
				bonds (distance)  P-C4'  energy:  -17.533
				flat angles   C4'-P-C4'  energy:  -20.214
				flat angles    P-C4'-P   energy:  -20.624
				tors. eta vs tors. theta energy:   -9.175

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 16

Temperature: 1.282500

Total energy: -119.984171 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -119.984171 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -119.984171 (E_RNA)
		where:
			Base-Base interactions energy:  -49.368
			where:  short stacking energy:  -48.623 

			Base-Backbone interact. energy:   -0.256

			local  terms  energy: -70.360273
			where:
				bonds (distance)  C4'-P  energy:  -19.760
				bonds (distance)  P-C4'  energy:  -23.973
				flat angles   C4'-P-C4'  energy:  -12.878
				flat angles    P-C4'-P   energy:   -5.119
				tors. eta vs tors. theta energy:   -8.630

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 17

Temperature: 1.278000

Total energy: -139.758339 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -139.758339 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -139.758339 (E_RNA)
		where:
			Base-Base interactions energy:  -49.432
			where:  short stacking energy:  -49.280 

			Base-Backbone interact. energy:    0.463

			local  terms  energy: -90.789949
			where:
				bonds (distance)  C4'-P  energy:  -18.804
				bonds (distance)  P-C4'  energy:  -27.439
				flat angles   C4'-P-C4'  energy:  -24.798
				flat angles    P-C4'-P   energy:   -9.938
				tors. eta vs tors. theta energy:   -9.811

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 18

Temperature: 1.273500

Total energy: -124.549823 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -124.549823 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -124.549823 (E_RNA)
		where:
			Base-Base interactions energy:  -42.412
			where:  short stacking energy:  -38.234 

			Base-Backbone interact. energy:   -0.688

			local  terms  energy: -81.449958
			where:
				bonds (distance)  C4'-P  energy:  -22.754
				bonds (distance)  P-C4'  energy:  -23.773
				flat angles   C4'-P-C4'  energy:  -19.708
				flat angles    P-C4'-P   energy:  -14.020
				tors. eta vs tors. theta energy:   -1.195

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 19

Temperature: 1.269000

Total energy: -139.771057 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -139.771057 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -139.771057 (E_RNA)
		where:
			Base-Base interactions energy:  -51.704
			where:  short stacking energy:  -50.176 

			Base-Backbone interact. energy:    0.266

			local  terms  energy: -88.332500
			where:
				bonds (distance)  C4'-P  energy:  -23.832
				bonds (distance)  P-C4'  energy:  -26.203
				flat angles   C4'-P-C4'  energy:  -26.649
				flat angles    P-C4'-P   energy:    0.553
				tors. eta vs tors. theta energy:  -12.202

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 20

Temperature: 1.264500

Total energy: -143.120707 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -143.120707 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -143.120707 (E_RNA)
		where:
			Base-Base interactions energy:  -63.315
			where:  short stacking energy:  -48.798 

			Base-Backbone interact. energy:   -0.173

			local  terms  energy: -79.632455
			where:
				bonds (distance)  C4'-P  energy:  -22.792
				bonds (distance)  P-C4'  energy:  -26.925
				flat angles   C4'-P-C4'  energy:  -19.153
				flat angles    P-C4'-P   energy:  -12.062
				tors. eta vs tors. theta energy:    1.299

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 21

Temperature: 1.260000

Total energy: -137.524624 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -137.524624 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -137.524624 (E_RNA)
		where:
			Base-Base interactions energy:  -65.863
			where:  short stacking energy:  -65.863 

			Base-Backbone interact. energy:   -0.121

			local  terms  energy: -71.541314
			where:
				bonds (distance)  C4'-P  energy:  -16.856
				bonds (distance)  P-C4'  energy:  -21.483
				flat angles   C4'-P-C4'  energy:  -21.865
				flat angles    P-C4'-P   energy:   -6.749
				tors. eta vs tors. theta energy:   -4.588

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 22

Temperature: 1.255500

Total energy: -136.454490 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -136.454490 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -136.454490 (E_RNA)
		where:
			Base-Base interactions energy:  -57.842
			where:  short stacking energy:  -56.894 

			Base-Backbone interact. energy:   -1.392

			local  terms  energy: -77.220287
			where:
				bonds (distance)  C4'-P  energy:  -17.142
				bonds (distance)  P-C4'  energy:  -22.897
				flat angles   C4'-P-C4'  energy:  -20.150
				flat angles    P-C4'-P   energy:  -13.343
				tors. eta vs tors. theta energy:   -3.688

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 23

Temperature: 1.251000

Total energy: -131.068038 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -131.068038 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -131.068038 (E_RNA)
		where:
			Base-Base interactions energy:  -61.380
			where:  short stacking energy:  -61.380 

			Base-Backbone interact. energy:   -0.167

			local  terms  energy: -69.521185
			where:
				bonds (distance)  C4'-P  energy:  -14.445
				bonds (distance)  P-C4'  energy:  -16.596
				flat angles   C4'-P-C4'  energy:  -19.544
				flat angles    P-C4'-P   energy:  -10.639
				tors. eta vs tors. theta energy:   -8.297

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 24

Temperature: 1.246500

Total energy: -137.347020 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -137.347020 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -137.347020 (E_RNA)
		where:
			Base-Base interactions energy:  -56.987
			where:  short stacking energy:  -55.485 

			Base-Backbone interact. energy:    0.597

			local  terms  energy: -80.956931
			where:
				bonds (distance)  C4'-P  energy:  -21.007
				bonds (distance)  P-C4'  energy:  -21.126
				flat angles   C4'-P-C4'  energy:  -23.365
				flat angles    P-C4'-P   energy:   -6.116
				tors. eta vs tors. theta energy:   -9.343

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 25

Temperature: 1.242000

Total energy: -126.293271 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -126.293271 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -126.293271 (E_RNA)
		where:
			Base-Base interactions energy:  -43.413
			where:  short stacking energy:  -40.786 

			Base-Backbone interact. energy:   -1.736

			local  terms  energy: -81.143856
			where:
				bonds (distance)  C4'-P  energy:  -15.485
				bonds (distance)  P-C4'  energy:  -21.829
				flat angles   C4'-P-C4'  energy:  -23.185
				flat angles    P-C4'-P   energy:  -13.800
				tors. eta vs tors. theta energy:   -6.845

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 26

Temperature: 1.237500

Total energy: -152.555524 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -152.555524 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -152.555524 (E_RNA)
		where:
			Base-Base interactions energy:  -63.284
			where:  short stacking energy:  -54.749 

			Base-Backbone interact. energy:   -0.242

			local  terms  energy: -89.029461
			where:
				bonds (distance)  C4'-P  energy:  -20.284
				bonds (distance)  P-C4'  energy:  -21.661
				flat angles   C4'-P-C4'  energy:  -25.400
				flat angles    P-C4'-P   energy:  -14.622
				tors. eta vs tors. theta energy:   -7.062

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 27

Temperature: 1.233000

Total energy: -146.314867 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -146.314867 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -146.314867 (E_RNA)
		where:
			Base-Base interactions energy:  -58.945
			where:  short stacking energy:  -51.309 

			Base-Backbone interact. energy:   -1.662

			local  terms  energy: -85.707373
			where:
				bonds (distance)  C4'-P  energy:  -21.210
				bonds (distance)  P-C4'  energy:  -24.243
				flat angles   C4'-P-C4'  energy:  -23.252
				flat angles    P-C4'-P   energy:  -10.646
				tors. eta vs tors. theta energy:   -6.356

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 28

Temperature: 1.228500

Total energy: -171.456511 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -171.456511 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -171.456511 (E_RNA)
		where:
			Base-Base interactions energy:  -94.831
			where:  short stacking energy:  -54.272 

			Base-Backbone interact. energy:   -1.700

			local  terms  energy: -74.925589
			where:
				bonds (distance)  C4'-P  energy:  -27.108
				bonds (distance)  P-C4'  energy:  -16.850
				flat angles   C4'-P-C4'  energy:  -16.684
				flat angles    P-C4'-P   energy:  -10.868
				tors. eta vs tors. theta energy:   -3.417

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 29

Temperature: 1.224000

Total energy: -181.024158 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -181.024158 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -181.024158 (E_RNA)
		where:
			Base-Base interactions energy:  -91.492
			where:  short stacking energy:  -50.927 

			Base-Backbone interact. energy:   -0.726

			local  terms  energy: -88.806770
			where:
				bonds (distance)  C4'-P  energy:  -16.925
				bonds (distance)  P-C4'  energy:  -23.881
				flat angles   C4'-P-C4'  energy:  -22.581
				flat angles    P-C4'-P   energy:  -15.969
				tors. eta vs tors. theta energy:   -9.452

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 30

Temperature: 1.219500

Total energy: -239.934752 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -239.934752 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -239.934752 (E_RNA)
		where:
			Base-Base interactions energy: -163.747
			where:  short stacking energy:  -75.267 

			Base-Backbone interact. energy:   -0.379

			local  terms  energy: -75.808622
			where:
				bonds (distance)  C4'-P  energy:  -19.479
				bonds (distance)  P-C4'  energy:  -16.425
				flat angles   C4'-P-C4'  energy:  -17.557
				flat angles    P-C4'-P   energy:  -11.332
				tors. eta vs tors. theta energy:  -11.017

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 31

Temperature: 1.215000

Total energy: -271.259411 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -271.259411 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -271.259411 (E_RNA)
		where:
			Base-Base interactions energy: -160.101
			where:  short stacking energy:  -91.744 

			Base-Backbone interact. energy:   -0.224

			local  terms  energy: -110.934625
			where:
				bonds (distance)  C4'-P  energy:  -20.381
				bonds (distance)  P-C4'  energy:  -26.259
				flat angles   C4'-P-C4'  energy:  -22.575
				flat angles    P-C4'-P   energy:  -15.024
				tors. eta vs tors. theta energy:  -26.696

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 32

Temperature: 1.210500

Total energy: -260.851462 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -260.851462 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -260.851462 (E_RNA)
		where:
			Base-Base interactions energy: -168.687
			where:  short stacking energy:  -81.919 

			Base-Backbone interact. energy:   -0.415

			local  terms  energy: -91.749990
			where:
				bonds (distance)  C4'-P  energy:  -16.607
				bonds (distance)  P-C4'  energy:  -24.704
				flat angles   C4'-P-C4'  energy:  -21.199
				flat angles    P-C4'-P   energy:  -12.415
				tors. eta vs tors. theta energy:  -16.825

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 33

Temperature: 1.206000

Total energy: -272.284796 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -272.284796 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -272.284796 (E_RNA)
		where:
			Base-Base interactions energy: -170.872
			where:  short stacking energy:  -74.454 

			Base-Backbone interact. energy:   -0.029

			local  terms  energy: -101.383740
			where:
				bonds (distance)  C4'-P  energy:  -21.734
				bonds (distance)  P-C4'  energy:  -26.008
				flat angles   C4'-P-C4'  energy:  -22.379
				flat angles    P-C4'-P   energy:  -13.464
				tors. eta vs tors. theta energy:  -17.799

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 34

Temperature: 1.201500

Total energy: -304.832375 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -304.832375 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -304.832375 (E_RNA)
		where:
			Base-Base interactions energy: -193.635
			where:  short stacking energy: -100.109 

			Base-Backbone interact. energy:   -0.053

			local  terms  energy: -111.144001
			where:
				bonds (distance)  C4'-P  energy:  -22.890
				bonds (distance)  P-C4'  energy:  -24.009
				flat angles   C4'-P-C4'  energy:  -20.683
				flat angles    P-C4'-P   energy:  -14.833
				tors. eta vs tors. theta energy:  -28.729

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 35

Temperature: 1.197000

Total energy: -256.025752 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -256.025752 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -256.025752 (E_RNA)
		where:
			Base-Base interactions energy: -154.996
			where:  short stacking energy:  -89.088 

			Base-Backbone interact. energy:   -0.197

			local  terms  energy: -100.832992
			where:
				bonds (distance)  C4'-P  energy:  -24.248
				bonds (distance)  P-C4'  energy:  -17.916
				flat angles   C4'-P-C4'  energy:  -24.113
				flat angles    P-C4'-P   energy:   -7.039
				tors. eta vs tors. theta energy:  -27.516

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 36

Temperature: 1.192500

Total energy: -258.798891 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -258.798891 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -258.798891 (E_RNA)
		where:
			Base-Base interactions energy: -152.326
			where:  short stacking energy:  -79.751 

			Base-Backbone interact. energy:    0.373

			local  terms  energy: -106.846298
			where:
				bonds (distance)  C4'-P  energy:  -25.229
				bonds (distance)  P-C4'  energy:  -28.086
				flat angles   C4'-P-C4'  energy:  -22.305
				flat angles    P-C4'-P   energy:  -11.963
				tors. eta vs tors. theta energy:  -19.263

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 37

Temperature: 1.188000

Total energy: -297.419988 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -297.419988 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -297.419988 (E_RNA)
		where:
			Base-Base interactions energy: -188.677
			where:  short stacking energy:  -93.698 

			Base-Backbone interact. energy:   -0.007

			local  terms  energy: -108.735683
			where:
				bonds (distance)  C4'-P  energy:  -22.017
				bonds (distance)  P-C4'  energy:  -22.605
				flat angles   C4'-P-C4'  energy:  -18.202
				flat angles    P-C4'-P   energy:  -18.061
				tors. eta vs tors. theta energy:  -27.851

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 38

Temperature: 1.183500

Total energy: -292.146572 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -292.146572 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -292.146572 (E_RNA)
		where:
			Base-Base interactions energy: -180.888
			where:  short stacking energy:  -79.450 

			Base-Backbone interact. energy:    2.805

			local  terms  energy: -114.063629
			where:
				bonds (distance)  C4'-P  energy:  -27.709
				bonds (distance)  P-C4'  energy:  -23.371
				flat angles   C4'-P-C4'  energy:  -22.766
				flat angles    P-C4'-P   energy:  -16.729
				tors. eta vs tors. theta energy:  -23.489

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 39

Temperature: 1.179000

Total energy: -273.156299 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -273.156299 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -273.156299 (E_RNA)
		where:
			Base-Base interactions energy: -180.282
			where:  short stacking energy:  -87.587 

			Base-Backbone interact. energy:   -2.240

			local  terms  energy: -90.634989
			where:
				bonds (distance)  C4'-P  energy:  -15.039
				bonds (distance)  P-C4'  energy:  -22.295
				flat angles   C4'-P-C4'  energy:  -17.861
				flat angles    P-C4'-P   energy:  -12.525
				tors. eta vs tors. theta energy:  -22.915

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 40

Temperature: 1.174500

Total energy: -275.905483 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -275.905483 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -275.905483 (E_RNA)
		where:
			Base-Base interactions energy: -177.118
			where:  short stacking energy:  -89.182 

			Base-Backbone interact. energy:   -0.084

			local  terms  energy: -98.702724
			where:
				bonds (distance)  C4'-P  energy:  -22.323
				bonds (distance)  P-C4'  energy:  -20.894
				flat angles   C4'-P-C4'  energy:  -19.928
				flat angles    P-C4'-P   energy:  -13.137
				tors. eta vs tors. theta energy:  -22.420

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 41

Temperature: 1.170000

Total energy: -291.122224 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -291.122224 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -291.122224 (E_RNA)
		where:
			Base-Base interactions energy: -190.467
			where:  short stacking energy:  -87.576 

			Base-Backbone interact. energy:   -0.936

			local  terms  energy: -99.719504
			where:
				bonds (distance)  C4'-P  energy:  -18.364
				bonds (distance)  P-C4'  energy:  -20.431
				flat angles   C4'-P-C4'  energy:  -22.299
				flat angles    P-C4'-P   energy:  -17.559
				tors. eta vs tors. theta energy:  -21.066

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 42

Temperature: 1.165500

Total energy: -300.723278 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -300.723278 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -300.723278 (E_RNA)
		where:
			Base-Base interactions energy: -182.928
			where:  short stacking energy:  -84.046 

			Base-Backbone interact. energy:   -1.006

			local  terms  energy: -116.788959
			where:
				bonds (distance)  C4'-P  energy:  -19.269
				bonds (distance)  P-C4'  energy:  -25.882
				flat angles   C4'-P-C4'  energy:  -25.207
				flat angles    P-C4'-P   energy:  -19.727
				tors. eta vs tors. theta energy:  -26.704

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 43

Temperature: 1.161000

Total energy: -311.845590 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -311.845590 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -311.845590 (E_RNA)
		where:
			Base-Base interactions energy: -209.125
			where:  short stacking energy: -104.387 

			Base-Backbone interact. energy:    1.632

			local  terms  energy: -104.352751
			where:
				bonds (distance)  C4'-P  energy:  -19.848
				bonds (distance)  P-C4'  energy:  -18.119
				flat angles   C4'-P-C4'  energy:  -26.032
				flat angles    P-C4'-P   energy:  -12.043
				tors. eta vs tors. theta energy:  -28.311

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 44

Temperature: 1.156500

Total energy: -304.330532 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -304.330532 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -304.330532 (E_RNA)
		where:
			Base-Base interactions energy: -195.480
			where:  short stacking energy:  -86.697 

			Base-Backbone interact. energy:   -0.078

			local  terms  energy: -108.772750
			where:
				bonds (distance)  C4'-P  energy:  -23.955
				bonds (distance)  P-C4'  energy:  -22.175
				flat angles   C4'-P-C4'  energy:  -28.325
				flat angles    P-C4'-P   energy:  -16.087
				tors. eta vs tors. theta energy:  -18.230

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 45

Temperature: 1.152000

Total energy: -313.355433 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -313.355433 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -313.355433 (E_RNA)
		where:
			Base-Base interactions energy: -201.854
			where:  short stacking energy:  -99.630 

			Base-Backbone interact. energy:   -0.139

			local  terms  energy: -111.362171
			where:
				bonds (distance)  C4'-P  energy:  -17.899
				bonds (distance)  P-C4'  energy:  -27.619
				flat angles   C4'-P-C4'  energy:  -20.530
				flat angles    P-C4'-P   energy:  -18.863
				tors. eta vs tors. theta energy:  -26.451

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 46

Temperature: 1.147500

Total energy: -338.736131 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -338.736131 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -338.736131 (E_RNA)
		where:
			Base-Base interactions energy: -218.385
			where:  short stacking energy: -106.938 

			Base-Backbone interact. energy:   -0.088

			local  terms  energy: -120.263110
			where:
				bonds (distance)  C4'-P  energy:  -22.074
				bonds (distance)  P-C4'  energy:  -26.625
				flat angles   C4'-P-C4'  energy:  -21.948
				flat angles    P-C4'-P   energy:  -18.035
				tors. eta vs tors. theta energy:  -31.581

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 47

Temperature: 1.143000

Total energy: -342.656019 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -342.656019 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -342.656019 (E_RNA)
		where:
			Base-Base interactions energy: -224.509
			where:  short stacking energy: -107.575 

			Base-Backbone interact. energy:   -0.096

			local  terms  energy: -118.050989
			where:
				bonds (distance)  C4'-P  energy:  -21.888
				bonds (distance)  P-C4'  energy:  -21.825
				flat angles   C4'-P-C4'  energy:  -19.728
				flat angles    P-C4'-P   energy:  -17.681
				tors. eta vs tors. theta energy:  -36.929

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 48

Temperature: 1.138500

Total energy: -299.038122 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -299.038122 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -299.038122 (E_RNA)
		where:
			Base-Base interactions energy: -190.115
			where:  short stacking energy:  -89.179 

			Base-Backbone interact. energy:    1.264

			local  terms  energy: -110.186981
			where:
				bonds (distance)  C4'-P  energy:  -18.193
				bonds (distance)  P-C4'  energy:  -27.471
				flat angles   C4'-P-C4'  energy:  -24.104
				flat angles    P-C4'-P   energy:  -17.474
				tors. eta vs tors. theta energy:  -22.944

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 49

Temperature: 1.134000

Total energy: -295.152932 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -295.152932 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -295.152932 (E_RNA)
		where:
			Base-Base interactions energy: -194.697
			where:  short stacking energy:  -92.577 

			Base-Backbone interact. energy:   -0.226

			local  terms  energy: -100.230105
			where:
				bonds (distance)  C4'-P  energy:  -18.196
				bonds (distance)  P-C4'  energy:  -21.940
				flat angles   C4'-P-C4'  energy:  -24.781
				flat angles    P-C4'-P   energy:   -7.939
				tors. eta vs tors. theta energy:  -27.374

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 50

Temperature: 1.129500

Total energy: -319.838160 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -319.838160 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -319.838160 (E_RNA)
		where:
			Base-Base interactions energy: -213.705
			where:  short stacking energy: -102.719 

			Base-Backbone interact. energy:   -0.763

			local  terms  energy: -105.370377
			where:
				bonds (distance)  C4'-P  energy:  -19.734
				bonds (distance)  P-C4'  energy:  -24.499
				flat angles   C4'-P-C4'  energy:  -22.079
				flat angles    P-C4'-P   energy:  -16.316
				tors. eta vs tors. theta energy:  -22.743

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 51

Temperature: 1.125000

Total energy: -304.396626 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -304.396626 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -304.396626 (E_RNA)
		where:
			Base-Base interactions energy: -185.194
			where:  short stacking energy: -100.073 

			Base-Backbone interact. energy:   -0.827

			local  terms  energy: -118.375766
			where:
				bonds (distance)  C4'-P  energy:  -16.597
				bonds (distance)  P-C4'  energy:  -23.172
				flat angles   C4'-P-C4'  energy:  -28.042
				flat angles    P-C4'-P   energy:  -21.171
				tors. eta vs tors. theta energy:  -29.394

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 52

Temperature: 1.120500

Total energy: -329.618615 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -329.618615 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -329.618615 (E_RNA)
		where:
			Base-Base interactions energy: -209.433
			where:  short stacking energy: -116.638 

			Base-Backbone interact. energy:   -0.426

			local  terms  energy: -119.760290
			where:
				bonds (distance)  C4'-P  energy:  -15.974
				bonds (distance)  P-C4'  energy:  -26.672
				flat angles   C4'-P-C4'  energy:  -26.437
				flat angles    P-C4'-P   energy:  -19.237
				tors. eta vs tors. theta energy:  -31.440

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 53

Temperature: 1.116000

Total energy: -317.223918 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -317.223918 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -317.223918 (E_RNA)
		where:
			Base-Base interactions energy: -198.071
			where:  short stacking energy: -114.057 

			Base-Backbone interact. energy:   -0.311

			local  terms  energy: -118.842668
			where:
				bonds (distance)  C4'-P  energy:  -24.072
				bonds (distance)  P-C4'  energy:  -19.323
				flat angles   C4'-P-C4'  energy:  -28.833
				flat angles    P-C4'-P   energy:  -13.142
				tors. eta vs tors. theta energy:  -33.472

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 54

Temperature: 1.111500

Total energy: -312.899527 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -312.899527 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -312.899527 (E_RNA)
		where:
			Base-Base interactions energy: -215.904
			where:  short stacking energy: -100.765 

			Base-Backbone interact. energy:   -0.536

			local  terms  energy: -96.459502
			where:
				bonds (distance)  C4'-P  energy:  -18.491
				bonds (distance)  P-C4'  energy:  -12.645
				flat angles   C4'-P-C4'  energy:  -25.422
				flat angles    P-C4'-P   energy:  -13.587
				tors. eta vs tors. theta energy:  -26.315

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 55

Temperature: 1.107000

Total energy: -309.156494 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -309.156494 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -309.156494 (E_RNA)
		where:
			Base-Base interactions energy: -201.181
			where:  short stacking energy:  -89.608 

			Base-Backbone interact. energy:   -0.284

			local  terms  energy: -107.691552
			where:
				bonds (distance)  C4'-P  energy:  -25.374
				bonds (distance)  P-C4'  energy:  -20.003
				flat angles   C4'-P-C4'  energy:  -22.310
				flat angles    P-C4'-P   energy:  -15.381
				tors. eta vs tors. theta energy:  -24.623

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 56

Temperature: 1.102500

Total energy: -296.335870 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -296.335870 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -296.335870 (E_RNA)
		where:
			Base-Base interactions energy: -190.204
			where:  short stacking energy:  -97.616 

			Base-Backbone interact. energy:    0.138

			local  terms  energy: -106.269239
			where:
				bonds (distance)  C4'-P  energy:  -22.177
				bonds (distance)  P-C4'  energy:  -23.905
				flat angles   C4'-P-C4'  energy:  -24.336
				flat angles    P-C4'-P   energy:  -13.807
				tors. eta vs tors. theta energy:  -22.044

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 57

Temperature: 1.098000

Total energy: -318.909175 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -318.909175 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -318.909175 (E_RNA)
		where:
			Base-Base interactions energy: -212.715
			where:  short stacking energy:  -99.512 

			Base-Backbone interact. energy:    2.933

			local  terms  energy: -109.127671
			where:
				bonds (distance)  C4'-P  energy:  -24.368
				bonds (distance)  P-C4'  energy:  -24.010
				flat angles   C4'-P-C4'  energy:  -18.014
				flat angles    P-C4'-P   energy:  -17.217
				tors. eta vs tors. theta energy:  -25.519

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 58

Temperature: 1.093500

Total energy: -329.891879 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -329.891879 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -329.891879 (E_RNA)
		where:
			Base-Base interactions energy: -219.693
			where:  short stacking energy: -101.605 

			Base-Backbone interact. energy:   -0.411

			local  terms  energy: -109.787957
			where:
				bonds (distance)  C4'-P  energy:  -24.336
				bonds (distance)  P-C4'  energy:  -18.084
				flat angles   C4'-P-C4'  energy:  -26.320
				flat angles    P-C4'-P   energy:  -16.026
				tors. eta vs tors. theta energy:  -25.021

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 59

Temperature: 1.089000

Total energy: -344.757847 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -344.757847 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -344.757847 (E_RNA)
		where:
			Base-Base interactions energy: -224.608
			where:  short stacking energy: -102.543 

			Base-Backbone interact. energy:   -0.106

			local  terms  energy: -120.043595
			where:
				bonds (distance)  C4'-P  energy:  -25.541
				bonds (distance)  P-C4'  energy:  -22.576
				flat angles   C4'-P-C4'  energy:  -21.422
				flat angles    P-C4'-P   energy:  -19.202
				tors. eta vs tors. theta energy:  -31.302

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 60

Temperature: 1.084500

Total energy: -336.967287 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -336.967287 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -336.967287 (E_RNA)
		where:
			Base-Base interactions energy: -216.510
			where:  short stacking energy: -110.893 

			Base-Backbone interact. energy:   -0.160

			local  terms  energy: -120.296726
			where:
				bonds (distance)  C4'-P  energy:  -22.075
				bonds (distance)  P-C4'  energy:  -24.011
				flat angles   C4'-P-C4'  energy:  -25.486
				flat angles    P-C4'-P   energy:  -18.713
				tors. eta vs tors. theta energy:  -30.012

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 61

Temperature: 1.080000

Total energy: -350.787843 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -350.787843 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -350.787843 (E_RNA)
		where:
			Base-Base interactions energy: -234.330
			where:  short stacking energy: -119.991 

			Base-Backbone interact. energy:   -0.529

			local  terms  energy: -115.928631
			where:
				bonds (distance)  C4'-P  energy:  -23.213
				bonds (distance)  P-C4'  energy:  -18.415
				flat angles   C4'-P-C4'  energy:  -20.978
				flat angles    P-C4'-P   energy:  -14.848
				tors. eta vs tors. theta energy:  -38.474

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 62

Temperature: 1.075500

Total energy: -339.505246 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -339.505246 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -339.505246 (E_RNA)
		where:
			Base-Base interactions energy: -220.649
			where:  short stacking energy: -112.265 

			Base-Backbone interact. energy:   -0.005

			local  terms  energy: -118.851416
			where:
				bonds (distance)  C4'-P  energy:  -18.362
				bonds (distance)  P-C4'  energy:  -21.978
				flat angles   C4'-P-C4'  energy:  -28.934
				flat angles    P-C4'-P   energy:  -16.941
				tors. eta vs tors. theta energy:  -32.637

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 63

Temperature: 1.071000

Total energy: -337.209532 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -337.209532 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -337.209532 (E_RNA)
		where:
			Base-Base interactions energy: -220.164
			where:  short stacking energy: -121.468 

			Base-Backbone interact. energy:   -0.916

			local  terms  energy: -116.130015
			where:
				bonds (distance)  C4'-P  energy:  -23.590
				bonds (distance)  P-C4'  energy:  -25.569
				flat angles   C4'-P-C4'  energy:  -21.162
				flat angles    P-C4'-P   energy:  -12.262
				tors. eta vs tors. theta energy:  -33.546

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 64

Temperature: 1.066500

Total energy: -333.002766 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -333.002766 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -333.002766 (E_RNA)
		where:
			Base-Base interactions energy: -213.800
			where:  short stacking energy: -103.287 

			Base-Backbone interact. energy:   -0.244

			local  terms  energy: -118.958585
			where:
				bonds (distance)  C4'-P  energy:  -22.634
				bonds (distance)  P-C4'  energy:  -24.102
				flat angles   C4'-P-C4'  energy:  -25.428
				flat angles    P-C4'-P   energy:  -20.650
				tors. eta vs tors. theta energy:  -26.145

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 65

Temperature: 1.062000

Total energy: -347.958138 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -347.958138 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -347.958138 (E_RNA)
		where:
			Base-Base interactions energy: -225.612
			where:  short stacking energy: -110.238 

			Base-Backbone interact. energy:   -0.632

			local  terms  energy: -121.714811
			where:
				bonds (distance)  C4'-P  energy:  -24.005
				bonds (distance)  P-C4'  energy:  -18.960
				flat angles   C4'-P-C4'  energy:  -27.541
				flat angles    P-C4'-P   energy:  -17.140
				tors. eta vs tors. theta energy:  -34.070

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 66

Temperature: 1.057500

Total energy: -360.127989 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -360.127989 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -360.127989 (E_RNA)
		where:
			Base-Base interactions energy: -236.294
			where:  short stacking energy: -117.316 

			Base-Backbone interact. energy:   -1.323

			local  terms  energy: -122.511464
			where:
				bonds (distance)  C4'-P  energy:  -21.254
				bonds (distance)  P-C4'  energy:  -24.522
				flat angles   C4'-P-C4'  energy:  -28.196
				flat angles    P-C4'-P   energy:  -13.632
				tors. eta vs tors. theta energy:  -34.907

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 67

Temperature: 1.053000

Total energy: -352.419221 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -352.419221 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -352.419221 (E_RNA)
		where:
			Base-Base interactions energy: -229.192
			where:  short stacking energy: -110.394 

			Base-Backbone interact. energy:   -1.391

			local  terms  energy: -121.836025
			where:
				bonds (distance)  C4'-P  energy:  -25.221
				bonds (distance)  P-C4'  energy:  -24.571
				flat angles   C4'-P-C4'  energy:  -20.894
				flat angles    P-C4'-P   energy:  -19.763
				tors. eta vs tors. theta energy:  -31.386

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 68

Temperature: 1.048500

Total energy: -357.047574 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -357.047574 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -357.047574 (E_RNA)
		where:
			Base-Base interactions energy: -240.723
			where:  short stacking energy: -122.837 

			Base-Backbone interact. energy:   -0.388

			local  terms  energy: -115.936522
			where:
				bonds (distance)  C4'-P  energy:  -18.061
				bonds (distance)  P-C4'  energy:  -25.139
				flat angles   C4'-P-C4'  energy:  -26.790
				flat angles    P-C4'-P   energy:  -14.944
				tors. eta vs tors. theta energy:  -31.002

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 69

Temperature: 1.044000

Total energy: -349.256444 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -349.256444 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -349.256444 (E_RNA)
		where:
			Base-Base interactions energy: -230.049
			where:  short stacking energy: -118.123 

			Base-Backbone interact. energy:    0.498

			local  terms  energy: -119.705428
			where:
				bonds (distance)  C4'-P  energy:  -16.547
				bonds (distance)  P-C4'  energy:  -21.840
				flat angles   C4'-P-C4'  energy:  -26.410
				flat angles    P-C4'-P   energy:  -21.397
				tors. eta vs tors. theta energy:  -33.512

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 70

Temperature: 1.039500

Total energy: -363.034852 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -363.034852 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -363.034852 (E_RNA)
		where:
			Base-Base interactions energy: -238.029
			where:  short stacking energy: -108.469 

			Base-Backbone interact. energy:   -0.004

			local  terms  energy: -125.001702
			where:
				bonds (distance)  C4'-P  energy:  -23.309
				bonds (distance)  P-C4'  energy:  -23.619
				flat angles   C4'-P-C4'  energy:  -24.153
				flat angles    P-C4'-P   energy:  -17.264
				tors. eta vs tors. theta energy:  -36.656

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 71

Temperature: 1.035000

Total energy: -369.754578 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -369.754578 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -369.754578 (E_RNA)
		where:
			Base-Base interactions energy: -240.787
			where:  short stacking energy: -118.094 

			Base-Backbone interact. energy:    0.223

			local  terms  energy: -129.190966
			where:
				bonds (distance)  C4'-P  energy:  -25.126
				bonds (distance)  P-C4'  energy:  -21.762
				flat angles   C4'-P-C4'  energy:  -27.025
				flat angles    P-C4'-P   energy:  -17.474
				tors. eta vs tors. theta energy:  -37.804

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 72

Temperature: 1.030500

Total energy: -350.682325 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -350.682325 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -350.682325 (E_RNA)
		where:
			Base-Base interactions energy: -235.127
			where:  short stacking energy: -116.621 

			Base-Backbone interact. energy:   -0.352

			local  terms  energy: -115.203192
			where:
				bonds (distance)  C4'-P  energy:  -17.232
				bonds (distance)  P-C4'  energy:  -20.030
				flat angles   C4'-P-C4'  energy:  -27.197
				flat angles    P-C4'-P   energy:  -14.751
				tors. eta vs tors. theta energy:  -35.993

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 73

Temperature: 1.026000

Total energy: -360.014749 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -360.014749 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -360.014749 (E_RNA)
		where:
			Base-Base interactions energy: -239.933
			where:  short stacking energy: -117.669 

			Base-Backbone interact. energy:   -0.700

			local  terms  energy: -119.381343
			where:
				bonds (distance)  C4'-P  energy:  -24.438
				bonds (distance)  P-C4'  energy:  -21.619
				flat angles   C4'-P-C4'  energy:  -26.802
				flat angles    P-C4'-P   energy:  -14.659
				tors. eta vs tors. theta energy:  -31.862

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 74

Temperature: 1.021500

Total energy: -357.060555 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -357.060555 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -357.060555 (E_RNA)
		where:
			Base-Base interactions energy: -240.871
			where:  short stacking energy: -120.819 

			Base-Backbone interact. energy:   -0.036

			local  terms  energy: -116.153317
			where:
				bonds (distance)  C4'-P  energy:  -22.615
				bonds (distance)  P-C4'  energy:  -25.479
				flat angles   C4'-P-C4'  energy:  -20.807
				flat angles    P-C4'-P   energy:  -11.075
				tors. eta vs tors. theta energy:  -36.178

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 75

Temperature: 1.017000

Total energy: -362.357630 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -362.357630 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -362.357630 (E_RNA)
		where:
			Base-Base interactions energy: -245.104
			where:  short stacking energy: -119.309 

			Base-Backbone interact. energy:   -0.375

			local  terms  energy: -116.878224
			where:
				bonds (distance)  C4'-P  energy:  -23.820
				bonds (distance)  P-C4'  energy:  -22.518
				flat angles   C4'-P-C4'  energy:  -20.639
				flat angles    P-C4'-P   energy:  -12.833
				tors. eta vs tors. theta energy:  -37.068

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 76

Temperature: 1.012500

Total energy: -363.118961 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -363.118961 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -363.118961 (E_RNA)
		where:
			Base-Base interactions energy: -232.811
			where:  short stacking energy: -117.621 

			Base-Backbone interact. energy:   -0.001

			local  terms  energy: -130.307542
			where:
				bonds (distance)  C4'-P  energy:  -26.104
				bonds (distance)  P-C4'  energy:  -25.755
				flat angles   C4'-P-C4'  energy:  -28.296
				flat angles    P-C4'-P   energy:  -16.299
				tors. eta vs tors. theta energy:  -33.853

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 77

Temperature: 1.008000

Total energy: -359.725807 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -359.725807 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -359.725807 (E_RNA)
		where:
			Base-Base interactions energy: -234.082
			where:  short stacking energy: -115.686 

			Base-Backbone interact. energy:   -0.003

			local  terms  energy: -125.639969
			where:
				bonds (distance)  C4'-P  energy:  -27.934
				bonds (distance)  P-C4'  energy:  -22.282
				flat angles   C4'-P-C4'  energy:  -24.191
				flat angles    P-C4'-P   energy:  -14.918
				tors. eta vs tors. theta energy:  -36.315

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 78

Temperature: 1.003500

Total energy: -350.134522 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -350.134522 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -350.134522 (E_RNA)
		where:
			Base-Base interactions energy: -238.999
			where:  short stacking energy: -104.788 

			Base-Backbone interact. energy:   -1.446

			local  terms  energy: -109.689154
			where:
				bonds (distance)  C4'-P  energy:  -22.309
				bonds (distance)  P-C4'  energy:  -19.852
				flat angles   C4'-P-C4'  energy:  -23.362
				flat angles    P-C4'-P   energy:  -11.141
				tors. eta vs tors. theta energy:  -33.025

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 79

Temperature: 0.999000

Total energy: -365.130084 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -365.130084 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -365.130084 (E_RNA)
		where:
			Base-Base interactions energy: -236.860
			where:  short stacking energy: -117.706 

			Base-Backbone interact. energy:   -0.381

			local  terms  energy: -127.889174
			where:
				bonds (distance)  C4'-P  energy:  -22.617
				bonds (distance)  P-C4'  energy:  -26.830
				flat angles   C4'-P-C4'  energy:  -25.306
				flat angles    P-C4'-P   energy:  -20.092
				tors. eta vs tors. theta energy:  -33.045

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 80

Temperature: 0.994500

Total energy: -364.206892 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -364.206892 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -364.206892 (E_RNA)
		where:
			Base-Base interactions energy: -238.806
			where:  short stacking energy: -123.163 

			Base-Backbone interact. energy:   -0.087

			local  terms  energy: -125.314011
			where:
				bonds (distance)  C4'-P  energy:  -23.859
				bonds (distance)  P-C4'  energy:  -24.437
				flat angles   C4'-P-C4'  energy:  -22.744
				flat angles    P-C4'-P   energy:  -17.561
				tors. eta vs tors. theta energy:  -36.713

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 81

Temperature: 0.990000

Total energy: -359.790843 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -359.790843 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -359.790843 (E_RNA)
		where:
			Base-Base interactions energy: -240.202
			where:  short stacking energy: -114.305 

			Base-Backbone interact. energy:   -0.103

			local  terms  energy: -119.485956
			where:
				bonds (distance)  C4'-P  energy:  -15.083
				bonds (distance)  P-C4'  energy:  -27.551
				flat angles   C4'-P-C4'  energy:  -26.293
				flat angles    P-C4'-P   energy:  -18.853
				tors. eta vs tors. theta energy:  -31.706

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 82

Temperature: 0.985500

Total energy: -356.345079 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -356.345079 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -356.345079 (E_RNA)
		where:
			Base-Base interactions energy: -229.587
			where:  short stacking energy: -115.254 

			Base-Backbone interact. energy:   -0.212

			local  terms  energy: -126.545714
			where:
				bonds (distance)  C4'-P  energy:  -24.847
				bonds (distance)  P-C4'  energy:  -27.653
				flat angles   C4'-P-C4'  energy:  -25.222
				flat angles    P-C4'-P   energy:  -17.255
				tors. eta vs tors. theta energy:  -31.569

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 83

Temperature: 0.981000

Total energy: -354.245599 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -354.245599 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -354.245599 (E_RNA)
		where:
			Base-Base interactions energy: -235.851
			where:  short stacking energy: -106.341 

			Base-Backbone interact. energy:   -0.132

			local  terms  energy: -118.262864
			where:
				bonds (distance)  C4'-P  energy:  -20.765
				bonds (distance)  P-C4'  energy:  -19.673
				flat angles   C4'-P-C4'  energy:  -27.436
				flat angles    P-C4'-P   energy:  -16.726
				tors. eta vs tors. theta energy:  -33.662

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 84

Temperature: 0.976500

Total energy: -370.275320 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -370.275320 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -370.275320 (E_RNA)
		where:
			Base-Base interactions energy: -246.163
			where:  short stacking energy: -121.334 

			Base-Backbone interact. energy:   -0.361

			local  terms  energy: -123.750947
			where:
				bonds (distance)  C4'-P  energy:  -22.036
				bonds (distance)  P-C4'  energy:  -19.699
				flat angles   C4'-P-C4'  energy:  -26.547
				flat angles    P-C4'-P   energy:  -19.568
				tors. eta vs tors. theta energy:  -35.900

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 85

Temperature: 0.972000

Total energy: -370.804933 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -370.804933 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -370.804933 (E_RNA)
		where:
			Base-Base interactions energy: -242.736
			where:  short stacking energy: -115.792 

			Base-Backbone interact. energy:   -0.742

			local  terms  energy: -127.326679
			where:
				bonds (distance)  C4'-P  energy:  -22.359
				bonds (distance)  P-C4'  energy:  -25.595
				flat angles   C4'-P-C4'  energy:  -22.142
				flat angles    P-C4'-P   energy:  -21.472
				tors. eta vs tors. theta energy:  -35.760

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 86

Temperature: 0.967500

Total energy: -379.981763 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -379.981763 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -379.981763 (E_RNA)
		where:
			Base-Base interactions energy: -255.180
			where:  short stacking energy: -123.653 

			Base-Backbone interact. energy:   -0.011

			local  terms  energy: -124.791042
			where:
				bonds (distance)  C4'-P  energy:  -24.783
				bonds (distance)  P-C4'  energy:  -26.982
				flat angles   C4'-P-C4'  energy:  -21.389
				flat angles    P-C4'-P   energy:  -13.986
				tors. eta vs tors. theta energy:  -37.651

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 87

Temperature: 0.963000

Total energy: -376.784859 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -376.784859 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -376.784859 (E_RNA)
		where:
			Base-Base interactions energy: -251.787
			where:  short stacking energy: -125.382 

			Base-Backbone interact. energy:   -0.768

			local  terms  energy: -124.229493
			where:
				bonds (distance)  C4'-P  energy:  -20.754
				bonds (distance)  P-C4'  energy:  -21.660
				flat angles   C4'-P-C4'  energy:  -27.308
				flat angles    P-C4'-P   energy:  -16.639
				tors. eta vs tors. theta energy:  -37.869

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 88

Temperature: 0.958500

Total energy: -362.382726 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -362.382726 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -362.382726 (E_RNA)
		where:
			Base-Base interactions energy: -242.047
			where:  short stacking energy: -130.278 

			Base-Backbone interact. energy:   -0.664

			local  terms  energy: -119.671651
			where:
				bonds (distance)  C4'-P  energy:  -18.487
				bonds (distance)  P-C4'  energy:  -24.159
				flat angles   C4'-P-C4'  energy:  -24.865
				flat angles    P-C4'-P   energy:  -17.097
				tors. eta vs tors. theta energy:  -35.064

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 89

Temperature: 0.954000

Total energy: -365.545292 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -365.545292 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -365.545292 (E_RNA)
		where:
			Base-Base interactions energy: -250.703
			where:  short stacking energy: -120.036 

			Base-Backbone interact. energy:   -0.154

			local  terms  energy: -114.688244
			where:
				bonds (distance)  C4'-P  energy:  -20.034
				bonds (distance)  P-C4'  energy:  -21.760
				flat angles   C4'-P-C4'  energy:  -25.011
				flat angles    P-C4'-P   energy:  -15.514
				tors. eta vs tors. theta energy:  -32.370

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 90

Temperature: 0.949500

Total energy: -369.757205 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -369.757205 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -369.757205 (E_RNA)
		where:
			Base-Base interactions energy: -245.029
			where:  short stacking energy: -127.695 

			Base-Backbone interact. energy:   -1.538

			local  terms  energy: -123.190093
			where:
				bonds (distance)  C4'-P  energy:  -18.627
				bonds (distance)  P-C4'  energy:  -25.889
				flat angles   C4'-P-C4'  energy:  -27.985
				flat angles    P-C4'-P   energy:  -16.549
				tors. eta vs tors. theta energy:  -34.140

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 91

Temperature: 0.945000

Total energy: -367.031891 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -367.031891 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -367.031891 (E_RNA)
		where:
			Base-Base interactions energy: -252.503
			where:  short stacking energy: -125.737 

			Base-Backbone interact. energy:   -0.598

			local  terms  energy: -113.931727
			where:
				bonds (distance)  C4'-P  energy:  -24.099
				bonds (distance)  P-C4'  energy:  -19.056
				flat angles   C4'-P-C4'  energy:  -20.619
				flat angles    P-C4'-P   energy:  -13.524
				tors. eta vs tors. theta energy:  -36.633

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 92

Temperature: 0.940500

Total energy: -369.593416 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -369.593416 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -369.593416 (E_RNA)
		where:
			Base-Base interactions energy: -244.730
			where:  short stacking energy: -110.052 

			Base-Backbone interact. energy:   -0.108

			local  terms  energy: -124.755601
			where:
				bonds (distance)  C4'-P  energy:  -26.455
				bonds (distance)  P-C4'  energy:  -24.946
				flat angles   C4'-P-C4'  energy:  -22.024
				flat angles    P-C4'-P   energy:  -21.838
				tors. eta vs tors. theta energy:  -29.494

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 93

Temperature: 0.936000

Total energy: -381.659185 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -381.659185 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -381.659185 (E_RNA)
		where:
			Base-Base interactions energy: -255.131
			where:  short stacking energy: -132.030 

			Base-Backbone interact. energy:   -0.692

			local  terms  energy: -125.836166
			where:
				bonds (distance)  C4'-P  energy:  -23.501
				bonds (distance)  P-C4'  energy:  -23.163
				flat angles   C4'-P-C4'  energy:  -24.101
				flat angles    P-C4'-P   energy:  -20.129
				tors. eta vs tors. theta energy:  -34.941

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 94

Temperature: 0.931500

Total energy: -369.523961 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -369.523961 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -369.523961 (E_RNA)
		where:
			Base-Base interactions energy: -243.086
			where:  short stacking energy: -120.357 

			Base-Backbone interact. energy:   -0.531

			local  terms  energy: -125.907086
			where:
				bonds (distance)  C4'-P  energy:  -24.976
				bonds (distance)  P-C4'  energy:  -20.283
				flat angles   C4'-P-C4'  energy:  -24.711
				flat angles    P-C4'-P   energy:  -21.109
				tors. eta vs tors. theta energy:  -34.828

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 95

Temperature: 0.927000

Total energy: -375.375416 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -375.375416 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -375.375416 (E_RNA)
		where:
			Base-Base interactions energy: -247.354
			where:  short stacking energy: -128.175 

			Base-Backbone interact. energy:   -0.128

			local  terms  energy: -127.893414
			where:
				bonds (distance)  C4'-P  energy:  -23.370
				bonds (distance)  P-C4'  energy:  -22.428
				flat angles   C4'-P-C4'  energy:  -22.770
				flat angles    P-C4'-P   energy:  -18.212
				tors. eta vs tors. theta energy:  -41.113

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 96

Temperature: 0.922500

Total energy: -378.102747 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -378.102747 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -378.102747 (E_RNA)
		where:
			Base-Base interactions energy: -244.715
			where:  short stacking energy: -128.814 

			Base-Backbone interact. energy:   -0.783

			local  terms  energy: -132.604464
			where:
				bonds (distance)  C4'-P  energy:  -23.214
				bonds (distance)  P-C4'  energy:  -25.683
				flat angles   C4'-P-C4'  energy:  -27.502
				flat angles    P-C4'-P   energy:  -18.108
				tors. eta vs tors. theta energy:  -38.098

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 97

Temperature: 0.918000

Total energy: -371.457132 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -371.457132 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -371.457132 (E_RNA)
		where:
			Base-Base interactions energy: -247.325
			where:  short stacking energy: -124.660 

			Base-Backbone interact. energy:    0.198

			local  terms  energy: -124.329531
			where:
				bonds (distance)  C4'-P  energy:  -22.516
				bonds (distance)  P-C4'  energy:  -24.698
				flat angles   C4'-P-C4'  energy:  -26.474
				flat angles    P-C4'-P   energy:  -20.887
				tors. eta vs tors. theta energy:  -29.755

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 98

Temperature: 0.913500

Total energy: -370.478142 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -370.478142 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -370.478142 (E_RNA)
		where:
			Base-Base interactions energy: -240.481
			where:  short stacking energy: -123.642 

			Base-Backbone interact. energy:   -0.307

			local  terms  energy: -129.690141
			where:
				bonds (distance)  C4'-P  energy:  -26.243
				bonds (distance)  P-C4'  energy:  -22.404
				flat angles   C4'-P-C4'  energy:  -23.335
				flat angles    P-C4'-P   energy:  -22.476
				tors. eta vs tors. theta energy:  -35.231

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 99

Temperature: 0.909000

Total energy: -369.828002 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -369.828002 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -369.828002 (E_RNA)
		where:
			Base-Base interactions energy: -240.251
			where:  short stacking energy: -120.587 

			Base-Backbone interact. energy:    0.051

			local  terms  energy: -129.628695
			where:
				bonds (distance)  C4'-P  energy:  -27.060
				bonds (distance)  P-C4'  energy:  -19.709
				flat angles   C4'-P-C4'  energy:  -27.729
				flat angles    P-C4'-P   energy:  -16.605
				tors. eta vs tors. theta energy:  -38.525

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 100

Temperature: 0.904500

Total energy: -370.275283 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -370.275283 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -370.275283 (E_RNA)
		where:
			Base-Base interactions energy: -239.297
			where:  short stacking energy: -115.675 

			Base-Backbone interact. energy:   -0.619

			local  terms  energy: -130.359743
			where:
				bonds (distance)  C4'-P  energy:  -28.132
				bonds (distance)  P-C4'  energy:  -22.822
				flat angles   C4'-P-C4'  energy:  -26.228
				flat angles    P-C4'-P   energy:  -17.129
				tors. eta vs tors. theta energy:  -36.049

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)
=====================================
Write number: 101

Temperature: 0.900000

Total energy: -376.252102 (ES_TOTAL = E_TOTAL + S_TOTAL)
where:

	RNA energy: -376.252102 (E_RNA + S_DIST_RNA + S_LIMSPR_RNA)
	where:
		Molecular energy: -376.252102 (E_RNA)
		where:
			Base-Base interactions energy: -247.641
			where:  short stacking energy: -117.191 

			Base-Backbone interact. energy:   -0.140

			local  terms  energy: -128.470995
			where:
				bonds (distance)  C4'-P  energy:  -22.387
				bonds (distance)  P-C4'  energy:  -25.280
				flat angles   C4'-P-C4'  energy:  -28.561
				flat angles    P-C4'-P   energy:  -13.748
				tors. eta vs tors. theta energy:  -38.495

		Dist. restrs. and SS energy:    0.000 (S_DIST_RNA)

		chem. prob. restrs. energy:    0.000 (S_CHEM_RNA)

		Limit. sphere exceed penalty:    0.000 (S_LIMSPR_RNA)


.writing output
current total energy: -354.393609
recalc. total energy: -354.393609
numberOfNucleotides: 35
initial temperature kT: 1.350000
moves confirmed at first:  5297118
moves confirmed later: 6181208
all moves confirmed: 11478326
percent of confirmed moves: 7.173954
out arg RESULTS//1/B23_35_simRNA-b94678c7_01

 Time of doing 1600000 iterations:  664.263 seconds