Reaction | Reacting groups | Substrates | Product | Metal ion | Linkage | Seq description | RNA cleavage |
Group 1 - 2'-OH of L-rG Group 2 - vicinal phosphate |
S: cleavage in cis |
specific cleavage at desired position |
metal ion dependency not reported |
RNA phosphodiester | N 60 |
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Buffer conditions |
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60 mM HEPES pH 7.5, 300 mM NaCl, 100 mM KCl, 15 mM MgCl2, 15 mM MnCl2 |
kcat/ kobs |
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k = 0.33 min-1 |
Catalytic region of the DNAzyme |
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CGAACGAAAAGTAACAGGCCCTCCTCATTACCATCCATGGAAGCATAGTTTCACGTCCCT |
Notes |
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The RNA substrate contains a single guanosine L-ribonucleotide (LrG) as the cleavage site. |
Year of Publication | First Author | Laboratory | Title | PubMed ID | DOI | Reaction |
---|---|---|---|---|---|---|
2015 | K Tram | Y Li | An Efficient Catalytic DNA that Cleaves L-RNA. | 25946137 | 10.1371/journal.pone.0126402 | RNA cleavage |