DNAmoreDB - A Database of Deoxyribozymes

DNAzyme description

 Reaction  Reacting groups  Substrates Product  Metal ion Linkage  Seq description
RNA cleavage Group 1 - 2'-OH of L-rG

Group 2 - vicinal phosphate

S: cleavage in cis
specific cleavage at desired position metal ion dependency not reported
RNA phosphodiester N 60
 Buffer conditions
60 mM HEPES pH 7.5, 300 mM NaCl, 100 mM KCl, 15 mM MgCl2, 15 mM MnCl2
 kcat/ kobs
k = 0.33 min-1
 Catalytic region of the DNAzyme
CGAACGAAAAGTAACAGGCCCTCCTCATTACCATCCATGGAAGCATAGTTTCACGTCCCT
Notes
The RNA substrate contains a single guanosine L-ribonucleotide (LrG) as the cleavage site.

 Reported in...

Year of Publication First Author Laboratory Title PubMed ID DOI Reaction
2015 K Tram Y Li An Efficient Catalytic DNA that Cleaves L-RNA. 25946137 10.1371/journal.pone.0126402 RNA cleavage

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