DNAmoreDB - A Database of Deoxyribozymes

DNAzyme description

 Reaction  Substrates Product  Metal ion  Seq description
DNA depurination S: GAGCTACGTTTTTTTGGAAGAGATGGCGACTACAA
Cleavage of the N-glycosidic bond of residue G17 Mn2+
Mg2+
Ca2+
Ba2+
N *
 Buffer conditions
10 mM MgCl2, 150 mM NaCl, 1 mM spermine, 0.01% SDS, 50 mM Hepes pH 7.5
 kcat/ kobs
kobs = 0.2 min-1
 Catalytic region of the DNAzyme
TGGCGACTACAAAGATATTCTCGGGCAGTTAATGCTTATTGATATCTC
Notes
The original goal of the in vitro selection was to select for an O-glycosidase DNA enzyme that could cleave a target disaccharide, instead, N-glycosylase activity emerged.

 Reported in...

Year of Publication First Author Laboratory Title PubMed ID DOI Reaction
2000 T L Sheppard G F Joyce A DNA enzyme with N-glycosylase activity. 10884411 10.1073/pnas.97.14.7802 DNA depurination

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