DNAmoreDB - A Database of Deoxyribozymes

DNAzyme description

 Reaction  Reacting groups  Substrates  Metal ion Linkage  Seq description
Covalent Modification of Amino Acid Side Chains Group 1 - aliphatic amino group

Group 2 - 5′-phosphorimidazolide

L: DNA-C3-NH2
R: 5′-phosphorimidazolide-activated DNA oligonucleotide
Mn2+
phosphoramidate (P–N) linkage N 40
 Buffer conditions
70 mM HEPES pH 7.5 with 40 mM MgCl2, 20 mM MnCl2, 1 mM ZnCl2, 150 mM NaCl
 Yield (%) kcat/ kobs
80-90 kobs = 0.37 h-1
 Catalytic region of the DNAzyme
CAAGGGGAACGAGGTTGTGAGAAGTAAGGGCGTGAGTAGC

 Reported in...

Year of Publication First Author Laboratory Title PubMed ID DOI Reaction
2014 B M Brandsen S K Silverman DNA-catalyzed lysine side chain modification. 24981820 10.1002/anie.201404622 Covalent Modification of Amino Acid Side Chains

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