tRNAmodpred


Results for job: Escherichia coli

Job id: bf7b0ee8-f223-4fc0-9cdc-c3d414cd0eb9
Applied phylogenetic filters:

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Query tRNA sequences:

accept| | D-domain ||anticodon domain || variable region || T-domain ||accept|
10| 20| 30| 40| 50| 60| 70|
Sequence name012345678901234567-890--1234567890123456789012345eeeeeeeeeeeeeeeeeee6789012345678901234567890123456
tRNA Ala VGC Escherichia coli prokaryotic cytosol-GGGGCUAUAGCUCAGCU-GGG--AGAGCGCCUGCUUUGCACGCAGGAG-------------------GUCUGCGGUUCGAUCCCGCAUAGCUCCACCA
tRNA Ala GGC Escherichia coli prokaryotic cytosol-GGGGCUAUAGCUCAGCU-GGG--AGAGCGCUUGCAUGGCAUGCAAGAG-------------------GUCAGCGGUUCGAUCCCGCUUAGCUCCACCA
tRNA Arg ICG Escherichia coli prokaryotic cytosol-GCAUCCGUAGCUCAGCU-GGAU-AGAGUACUCGGCUACGAACCGAGCG-------------------GUCGGAGGUUCGAAUCCUCCCGGAUGCACCA
tRNA Arg CCG Escherichia coli prokaryotic cytosol-GCGCCCGUAGCUCAGCU-GGAU-AGAGCGCUGCCCUCCGGAGGCAGAG-------------------GUCUCAGGUUCGAAUCCUGUCGGGCGCGCCA
tRNA Arg UCU Escherichia coli prokaryotic cytosol-GCGCCCUUAGCUCAGUU-GGAU-AGAGCAACGACCUUCUAAGUCGUGG-------------------GCCGCAGGUUCGAAUCCUGCAGGGCGCGCCA
tRNA Arg CCU Escherichia coli prokaryotic cytosol-GUCCUCUUAGUUAAAU--GGAU-AUAACGAGCCCCUCCUAAGGGCUAA-------------------U-UGCAGGUUCGAUUCCUGCAGGGGACACCA
tRNA Asn GUU Escherichia coli prokaryotic cytosol-UCCUCUGUAGUUCAGUC-GGU--AGAACGGCGGACUGUUAAUCCGUAU-------------------GUCACUGGUUCGAGUCCAGUCAGAGGAGCCA
tRNA Asp ⊄UC Escherichia coli prokaryotic cytosol-GGAGCGGUAGUUCAGUC-GGUU-AGAAUACCUGCCUGUCACGCAGGGG-------------------GUCGCGGGUUCGAGUCCCGUCCGUUCCGCCA
tRNA Cys GCA Escherichia coli prokaryotic cytosol-GGCGCGUUAACAAAGC--GGU--UAUGUAGCGGAUUGCAAAUCCGUCU-------------------A-GUCCGGUUCGACUCCGGAACGCGCCUCCA
tRNA Gln UUG Escherichia coli prokaryotic cytosol-UGGGGUAUCGCCAAGC--GGU--AAGGCACCGGUUUUUGAUACCGGCA-------------------UUCCCUGGUUCGAAUCCAGGUACCCCAGCCA
tRNA Gln CUG Escherichia coli prokaryotic cytosol-UGGGGUAUCGCCAAGC--GGU--AAGGCACCGGAUUCUGAUUCCGGCA-------------------UUCCGAGGUUCGAAUCCUCGUACCCCAGCCA
tRNA Glu SUC Escherichia coli prokaryotic cytosol-GUCCCCUUCGUCUAGA--GGCCCAGGACACCGCCCUUUCACGGCGGUA-------------------A-CAGGGGUUCGAAUCCCCUAGGGGACGCCA
tRNA Gly CCC Escherichia coli prokaryotic cytosol-GCGGGCGUAGUUCAAU--GGU--AGAACGAGAGCUUCCCAAGCUCUAU-------------------A-CGAGGGUUCGAUUCCCUUCGCCCGCUCCA
tRNA Gly {CC Escherichia coli prokaryotic cytosol-GCGGGCAUCGUAUAAU--GGCU-AUUACCUCAGCCUUCCAAGCUGAUG-------------------A-UGCGGGUUCGAUUCCCGCUGCCCGCUCCA
tRNA Gly GCC Escherichia coli prokaryotic cytosol-GCGGGAAUAGCUCAGUU-GGU--AGAGCACGACCUUGCCAAGGUCGGG-------------------GUCGCGAGUUCGAGUCUCGUUUCCCGCUCCA
tRNA His GUG Escherichia coli prokaryotic cytosolGGUGGCUAUAGCUCAGUU-GGU--AGAGCCCUGGAUUGUGAUUCCAGUU-------------------GUCGUGGGUUCGAAUCCCAUUAGCCACCCCA
tRNA Ile GAU Escherichia coli prokaryotic cytosol-AGGCUUGUAGCUCAGGU-GGUU-AGAGCGCACCCCUGAUAAGGGUGAG-------------------GUCGGUGGUUCAAGUCCACUCAGGCCUACCA
tRNA Ile CAU1 Escherichia coli prokaryotic cytosol-GGCCCCUUAGCUCAGU--GGUU-AGAGCAGGCGACUCAUAAUCGCUUG-------------------GUCGCUGGUUCAAGUCCAGCAGGGGCCACCA
tRNA Ile CAU2 Escherichia coli prokaryotic cytosol-GGCCCUUUAGCUCAGU--GGUU-AGAGCAGGCGACUCAUAAUCGCUUG-------------------GUCGCUGGUUCAAGUCCAGCAAGGGCCACCA
tRNA Leu CAG Escherichia coli prokaryotic cytosol-GCGAAGGUGGCGGAAUU-GGUA-GACGCGCUAGCUUCAGGUGUUAGU-GUCC---UUAC----GGACG-UGGGGGUUCAAGUCCCCCCCCUCGCACCA
tRNA Leu GAG Escherichia coli prokaryotic cytosol-GCCGAGGUGGUGGAAUU-GGUA-GACACGCUACCUUGAGGUGGUAGU-GCCC---AAUA----GGGCU-UACGGGUUCAAGUCCCGUCCUCGGUACCA
tRNA Leu UAG Escherichia coli prokaryotic cytosol-GCGGGAGUGGCGAAAUU-GGUA-GACGCACCAGAUUUAGGUUCUGGC-GCC----GCAA-----GGUG-UGCGAGUUCAAGUCUCGCCUCCCGCACCA
tRNA Leu )AA Escherichia coli prokaryotic cytosol-GCCCGGAUGGUGGAAUC-GGUA-GACACAAGGGAUUUAAAAUCCCUC-GGCG---UUCG----CGCUG-UGCGGGUUCAAGUCCCGCUCCGGGUACCA
tRNA Leu BAA Escherichia coli prokaryotic cytosol-GCCGAAGUGGCGAAAUC-GGUA-GACGCAGUUGAUUCAAAAUCAACC-GUA----GAAA-----UACG-UGCCGGUUCGAGUCCGGCCUUCGGCACCA
tRNA Lys SUU Escherichia coli prokaryotic cytosol-GGGUCGUUAGCUCAGUU-GGU--AGAGCAGUUGACUUUUAAUCAAUUG-------------------GUCGCAGGUUCGAAUCCUGCACGACCCACCA
tRNA Met MAU Escherichia coli prokaryotic cytosol-GGCUACGUAGCUCAGUU-GGUU-AGAGCACAUCACUCAUAAUGAUGGG-------------------GUCACAGGUUCGAAUCCCGUCGUAGCCACCA
tRNA Phe GAA Escherichia coli prokaryotic cytosol-GCCCGGAUAGCUCAGUC-GGU--AGAGCAGGGGAUUGAAAAUCCCCGU-------------------GUCCUUGGUUCGAUUCCGAGUCCGGGCACCA
tRNA Pro CGG Escherichia coli prokaryotic cytosol-CGGUGAUUGGCGCAGCCUGGU--AGCGCACUUCGUUCGGGACGAAGGG-------------------GUCGGAGGUUCGAAUCCUCUAUCACCGACCA
tRNA Pro GGG Escherichia coli prokaryotic cytosol-CGGCACGUAGCGCAGCCUGGU--AGCGCACCGUCAUGGGGUGUCGGGG-------------------GUCGGAGGUUCAAAUCCUCUCGUGCCGACCA
tRNA Pro UGG Escherichia coli prokaryotic cytosol-CGGCGAGUAGCGCAGCUUGGU--AGCGCAACUGGUUUGGGACCAGUGG-------------------GUCGGAGGUUCGAAUCCUCUCUCGCCGACCA
tRNA Sec UCA Escherichia coli prokaryotic cytosol-_AAGAUCGUCGUCUCC--GGUG-AGGCGGCUGGACUUCAAAUCCAGU-UGGGGCCGC_GCGGUCCCG--GGCAGGUUCGACUCCUGUGAUCUU_GCCA
tRNA Ser UGA Escherichia coli prokaryotic cytosol-GGAAGUGUGGCCGAGC--GGUUGAAGGCACCGGUCUUGAAAACCGGC-GACCC--GAAA---GGGUU--CCAGAGUUCGAAUCUCUGCGCUUCCGCCA
tRNA Ser CGA Escherichia coli prokaryotic cytosol-GGAGAGAUGCCGGAGC--GGCUGAACGGACCGGUCUCGAAAACCGGA-GUAGGG-GCAA--CUCUAC--CGGGGGUUCAAAUCCCCCUCUCUCCGCCA
tRNA Ser GCU Escherichia coli prokaryotic cytosol-GGUGAGGUGGCCGAGA--GGCUGAAGGCGCUCCCCUGCUAAGGGAGU-AUGCGGUCAAAAGCUGCAU--CCGGGGUUCGAAUCCCCGCCUCACCGCCA
tRNA Ser GGA Escherichia coli prokaryotic cytosol-GGUGAGGUGUCCGAGU--GGUUGAAGGAGCACGCCUGGAAAGUGUGU-AUACG--GCAA---CGUAU--CGGGGGUUCGAAUCCCCCCCUCACCGCCA
tRNA Thr GGU1 Escherichia coli prokaryotic cytosol-GCUGAUAUGGCUCAGUU-GGU--AGAGCGCACCCUUGGUAAGGGUGAG-------------------GUCCCCAGUUCGACUCUGGGUAUCAGCACCA
tRNA Thr CGU Escherichia coli prokaryotic cytosol-GCCGAUAUAGCUCAGUU-GGU--AGAGCAGCGCAUUCGUAAUGCGAAG-------------------GUCGUAGGUUCGACUCCUAUUAUCGGCACCA
tRNA Thr GGU2 Escherichia coli prokaryotic cytosol-GCUGAUAUAGCUCAGUU-GGU--AGAGCGCACCCUUGGUAAGGGUGAG-------------------GUCGGCAGUUCGAAUCUGCCUAUCAGCACCA
tRNA Thr UGU Escherichia coli prokaryotic cytosol-GCCGACUUAGCUCAGUA-GGU--AGAGCAACUGACUUGUAAUCAGUAG-------------------GUCACCAGUUCGAUUCCGGUAGUCGGCACCA
tRNA Trp CCA Escherichia coli prokaryotic cytosol-AGGGGCGUAGUUCAAUU-GGU--AGAGCACCGGUCUCCAAAACCGGGU-------------------GUUGGGAGUUCGAGUCUCUCCGCCCCUGCCA
tRNA Tyr QUA1 Escherichia coli prokaryotic cytosol-GGUGGGGUUCCCGAGC--GGCCAAAGGGAGCAGACUGUAAAUCUGCC-GUC----AUC------GACUUCGAAGGUUCGAAUCCUUCCCCCACCACCA
tRNA Tyr QUA2 Escherichia coli prokaryotic cytosol-GGUGGGGUUCCCGAGC--GGCCAAAGGGAGCAGACUGUAAAUCUGCC-GUC----ACA------GACUUCGAAGGUUCGAAUCCUUCCCCCACCACCA
tRNA Val VAC Escherichia coli prokaryotic cytosol-GGGUGAUUAGCUCAGCU-GGG--AGAGCACCUCCCUUACAAGGAGGGG-------------------GUCGGCGGUUCGAUCCCGUCAUCACCCACCA
tRNA Val GAC1 Escherichia coli prokaryotic cytosol-GCGUCCGUAGCUCAGUU-GGUU-AGAGCACCACCUUGACAUGGUGGGG-------------------GUCGGUGGUUCGAGUCCACUCGGACGCACCA
tRNA Val GAC2 Escherichia coli prokaryotic cytosol-GCGUUCAUAGCUCAGUU-GGUU-AGAGCACCACCUUGACAUGGUGGGG-------------------GUCGUUGGUUCGAGUCCAAUUGAACGCACCA
tRNA Ini CAU1 Escherichia coli prokaryotic cytosol-CGCGGGGUGGAGCAGCCUGGU--AGCUCGUCGGGCUCAUAACCCGAAG-------------------GUCGUCGGUUCAAAUCCGGCCCCCGCAACCA
tRNA Ini CAU2 Escherichia coli prokaryotic cytosol-CGCGGGGUGGAGCAGCCUGGU--AGCUCGUCGGGCUCAUAACCCGAAG-------------------AUCGUCGGUUCAAAUCCGGCCCCCGCAACCA