International institute of molecular and cell biology in Warzawa

Subfamily Intron_gpII-B_BactE2


Download the aligments for this family. (.stk)

RNA Shape

Level1
((((()((()))(((())))((((((())((()))))())))))))((()()))(((((()))))(()())(())(((()))))
Level2
(()()()((()())()))(()())(()(()())()())

Consensus Secondary Structure representation

>predicted reference Intron_gpII-B_BactE2

GUGCGGCGGAGCAAAGGUCGUAUCAUAUAGCGGGUGGAAAUCCCGCCUGGUAAGGUCUAGCCAACCGCUCAGUAGCGAGCCUUGGAGCCCGUCGGGUAACCGGCGGGUUUAAGCGUAGGCAGCGAGGUAGCGGGCCGAAAGCCAAAAGGCUGAAGGGAUUGAGCCCCGAAAUAAAAUUAAAGUUGGGAGGGCCGAUGCUUUAACCCAAGCAGAAGGCAACAUUGUGGCAAUCGUUAAAGGCGAGACUGCCGCGACCUCCCCGGGGUCACAGACCUCGGCACGCUAUACAUGGAUAUCACACGGCAACUCGGGAGACCCUGCCUCUUCUUGUUUCAGAAGAGUAUGGCCGACAAGCGAUAAAAAGGCGAGGAAGCCAAAUGAGAGGCAGGGAGUCGGAUCGCCGCGUAGUACCGAUGAAGCCGGGUAAUGCCGGUGGAGGAAAGGGGAAGCGACACAUUAAAGCCCUGGUACUAGGAGACACAUUAACCACACGCAGAGGUGGGCCAACGAAAUGUACGGGAACAAAAAUUACUAUGAGGAGCCGUGUGCGGGAAUUCCGCAAGCACGGUUCUGUGAGGGGGGUAGGCCGAGAGGCCUACCUCUACUCGAC

......((.((........(..(......(((((.......)))))(((((..(((.......))))).)))..((..((((.((((((((((((....)))))))))))...)..)))).))....(((((.(........(...................(((((.................(((((.(((..(((..........)))...))).........((.(................)).).....))))).)))))(...).....).).)))))............)).......)))).((..(((((((((((((...........))..((.............................))...)))))))))))..))(..(((.(.(......((......(((((......)))))...))....).)...)))((......................(...).....((((........))))................................)).((((((((((((((.....)))))..)))))))))(..((((((((..(........)..)))))).)))..)






Contribute: Everyone is welcome to give feedback concerning the database.
If you have any advice or suggestions for corrections or improvements, please : rnarchitecture@genesilico.pl

Copyright © Genesilico - All rights reserved