Subfamily Intron_gpII-B_BactB
Download the aligments for this family. (.stk)
RNA Shape
Level1
((((()))()(((((()))))((((())))((())))((((()(((()((())(())))))))))))(((())))((()))(()))(())((((()))))
Level2
((()()(()(()())(()(()(()())))))()()())()()
Consensus Secondary Structure representation
>predicted reference Intron_gpII-B_BactB
GUGCGACACGUUCCUCUAUAAGUGAAAAUGUCAUAGGCAUGGAAUGAAAAUGAUUGGGGUUCAUUAAUAGGAGCUCACAACUAAUAAUCCGAAAAGUGGAAUGAAGGCCGGUAACGCCAGCUGAAACACUUUCCCUAAUACUCCGACGUGCGUUAAACUGUUAUAGCAGUGAUAGGUACGAAGCUCGGUGAAGUCGGCUGAAUUUUACCCUGAAGCCACUUGGUGAAAGAGGUAUGAGGUAAAAGAUAGGCCGGGGGUCUAUAAAAUACCUAUGGUGAGAAUGUGUAAAGGCACUGACGAACUUCCGAAUGUACGGGUCUAAAAGCCUAAAGAAUACAGAAAGGUUCCGUUUGCAAUUCAAAUAGGUUGGUAAAUUACGGAUGAGUAAGAAUUUGAACUUAUGAAAAUCCGUAUAGCAGUCAAAGGCGCUAUAAGGUUUACAGGCUUAAAGGAAGCACCUAAGGGUAUUAUGUACAGAUAGGAUUAUUGGAACGUGGAAAGCCAACAACAUGUGAGACGACUAUCAUUCGAUGCGGUGAUUAUAUGGAGGUAAUAAUUCCGUAAUGUAUUUAUGGUUGUGAGAGUAGGGGCACAGUACCAAUGAAACUGUGUAAUAAAAGUGGAGGGAUGGCCCCAAGUCUAAUUAUAAAAAAACACAAAUCUUAACUAAAGAUAUAAAACAUUGGAAAUAUCUUAGGAGGUCAUAGUAAGACUAAGGAGAUUAUAAAAUUUCUAUUCUAAGAAAAAAAUUGAGUGAUUUGUGUCAUCGGAUAAAAAAUUAAACAGUUCGAUGGAACGCCGUAUGCGGGGAAACUCGCACGUACGGUGUGGAGCGGGGGAAAAGCUGGAGAUAACAUCAAAAGCUUACCUAUCGCUAU
...(..((((((.(....(((.........)..))).(..................................).......(((((((((...((((((.......((..((...).))..).....))))))((((....(((((((((((.(..................)...)))))....))))...)).(((((...((...(....................).............))....)))))))))((((....(((((...((((.(..................)...(((((........((..(................(........)..............................(.(((((......(..........)......))))).(((((.((.....)))))))..).......)..))...)))))))))....)))))..)....)))...)))))))))))))))....((.(.((.((..........................))..................................)).).)).......(((((......((........(..........).....))....)))))...((...................................................................(......)..........................................................................))..).((((((((((((((....))))))..))))))))..(((((((...(((((.((.......))...))))).)))..)))..)
