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Meta-Prediction of job: 775191THE FINAL CONSENSUS PREDICTON:Your protein is predicted to be extracellular with probability 52.46%.
![]() THE OUTPUTS OF PRIMARY PREDICTIONSSIGNAL PREDICTIONLipoprotein predictors
Dolop
prediction: it is not a lipoprotein
CYT score=-0.200913 Cut-off=-3 Best CYT 1 1 -0.200913 NO PLOT made - less than 4 putative cleavage sites predictedNO PLOT made - less than 4 putative cleavage sites predicted Tat predictorsprediction: Non-secretory protein
Signal peptide probability: 0.003 Max cleavage site probability: 0.002 between pos. 23 and 24
MKLSINKNTLESAVILCNAYVEKK-DSSTITSHLFFHADEDKLLIKASDYEIGINYKIKKIRVESSGFATA [0.002]
![]() ![]() TRANSMEMBRANE ALPHA-HELIX PREDICTIONS
TMHMM
inside 1 106 Detailed information: Exp number of AAs in TMHs: 0.00036 Exp number, first 60 AAs: 0.00018 Total prob of N-in: 0.57981
BETA-BARREL OMP PREDICTION
tmbHunt
prediction: no beta-barrel found
Score: -0.007730 from 6BBTMprotein to -6BBTMprotein ----------------------- Probability based scoring: ----------------------- Empirical scores:- Empirical Probability of a NON-BETA BARREL protein with this BBTM score: 0.178780 Empirical data - BBTM_score (1=bbtm -1=non bbtm): -0.007730 Empirical data - log P BBTM/NTM protein ratio: -0.044200 (Given no. sequences queried) Empirical data E-value: 0.000000 Observed scores:- Probability of a NON-BETA BARREL protein with this score: 0.358859 Log P BBTM/Non BBTM protein ratio: -1.065915 Conclusion: Non BBMP ------------------------
prediction: no beta-barrel found
SUBCELLULAR LOCALIZATION PREDICTIORS
Cello
prediction:cytoplasmic
prediction: cytoplasmic
prediction: unknown
Analysis Report: CMSVM- Unknown [No details] CytoSVM- Unknown [No details] ECSVM- Unknown [No details] ModHMM- Unknown [No internal helices found] Motif- Unknown [No motifs found] OMPMotif- Unknown [No motifs found] OMSVM- Unknown [No details] PPSVM- Unknown [No details] Profile- Unknown [No matches to profiles found] SCL-BLAST- Unknown [No matches against database] SCL-BLASTe- Unknown [No matches against database] Signal- Unknown [No signal peptide detected] Localization Scores: CytoplasmicMembrane 2.00 Cytoplasmic 2.00 OuterMembrane 2.00 Periplasmic 2.00 Extracellular 2.00 Final Prediction: Unknown
prediction:cytoplasmic
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